Molecular Medicine Israel

Top Technical Advances in 2018

From disastrous scientific setbacks to the upending of scientific dogma and the end of a 40-year search for a protein

ABOVE: A healthy adult bimaternal mouse with offspring of her own
LEYUN WANG
Mice with same-sex parents
In research published in October in Cell Stem Cell, researchers from the Chinese Academy of Sciences for the first time created mice from two male parents. (Mice with two female parents had been created before, and in the same paper, the team reported improving their technique for doing so.) Making animals from same-sex parents is challenging because the DNA from sperm and egg cells comes with very different epigenetic imprinting. The process for generating the bipaternal pups was a complex one, involving deleting some of the imprinted regions, and the mice died soon after birth. “Bimaternal reproduction, or parthenogenesis, is quite common among vertebrates in the nature, such as amphibians, reptiles, and fish,” writes coauthor Baoyang Hu in an email to The Scientist. “However, successful reproduction from two males is very rare.”

Tumor-destroying nanorobots
Nanoscale, self-assembling, DNA-origami sheets with a drug on the inside that unfold when they encounter a tumor-specific protein successfully shrank breast tumors in mice, researchers at Arizona State University, the National Center for Nanoscience and Technology in China, and colleagues reported in Nature Biotechnology in February. Although it remains to be seen whether the drug-delivery system will translate to humans, the study’s authors are “looking at specific binding to tumor cells, which is basically the holy grail for . . . cancer therapy,” says the University of Tennessee’s Scott Lenaghan.

AI for liquid biopsies
Artificial neural networks can process vast amounts of data and identify patterns that would likely elude a human doctor, making them strong candidates to sift through blood samples for signs of cancer. Multiple labs are now looking to artificial intelligence to help catch cancer early, and to identify features of individual patients’ cancers that indicate the suitability of particular treatments.

Virtual test animals
Computing power was central to another of this year’s methodological innovations, a program that can predict the results of animal-based toxicology screenings. Researchers led by Thomas Hartung of Johns Hopkins University developed the tool using data from thousands of toxicology tests, and found that it accurately predicted the results of such screenings 87 percent of the time. By comparison, repeating the assays themselves only reproduced the original results 81 percent of the time. The authors hope the software can reduce the use of experimental animals. “This won’t be the end of all animal testing,” Hartung tells The Scientist. “But this is an important step to take the bite out of it.”

Birds’ eye view
As some researchers look to minimize the use of lab animals, others want to maximize the information we can glean about those in the wild. Used correctly, drones can be key for that job, and researchers are putting them to work for everything from whale snot collection to detecting the size and condition of whole populations of sea turtles. “In the past, you couldn’t even pretend you were going to go and collect data at the level of accuracy and precision we can now get,” says Monash University ecologist Rohan Clarke.

Mouse eye view
It’s been a challenge to untangle the signals transmitting visual information to the brain, but a technique published in Science in June opens up a new way of recording those data. Researchers led by Charles Lieber of Harvard University developed a thin mesh that can be injected into the corner of a live mouse’s eye. There it unfurls and transmits electrical signals via tiny wires. Remarkably, the mesh has little effect on mice’s vision, and the animals are able to move around normally in between experiments.

The where of gene expression
Because of differences in how much certain genes are activated, neurons of the same subtype in difference locations may play very different roles. To better visualize where in tissue sections multiple genes are being expressed, Xiao Wang of Stanford University and colleagues developed STARmap, which involves converting tissue samples into a hydrogel to better detect barcodes that reveal the locations of target RNAs. “The [image] quality they demonstrate here is very impressive,” says molecular systems biologist Sten Linnarsson of Sweden’s Karolinska Institute who was not involved in the work.

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